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1_1




GATA5: FL: KW_TTACTT40NTAT_4: NAGATCNNNNNNNNGATAANR-m1!!: VR: 26187: QS: 100-0: Sg: 239826: Bk: 386129: GATA+Methylated Oligos: Doesn't care about CG methylation: Methylatable secondary site in allosteric context; Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_2




FOXJ1: FL: KW_TGCATA40NTCA_4: AA-m1!!: VR: 0: QS: -: Sg: 198833: Bk: 356425: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_3




NR2F1: FL: KW_TCCCTT40NCAT_4: RGGTCANAGGTCR-m1!!: VR: 36892: QS: 96-0: Sg: 221299: Bk: 348165: nuclear receptor+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_4




SMAD7: FL: KW_TTGCAG40NGAC_4: AA-m1: VR: 0: QS: -: Sg: 193142: Bk: 297622: MAD+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_5




RUNX3: FL: KW_TGGGCC40NGGA_4: AACCACRNNAACCACR-m1!!: VR: 512: QS: 100-0.4: Sg: 175477: Bk: 284967: RUNX+Methylated Oligos: CA are selected against CG: MethylMinusa.s. 3 3 4 4 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_6




E2F1: FL: KW_TGCTTC40NTTA_4b0: WTTTTGGCGCCAAAWT-m1!!: VR: 9: QS: 100-0.3: Sg: 247430: Bk: 134069: E2F+Methylated Oligos: motif doesn't change, but it is extremely weak: MethylMinus ??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_7




ZIC1: FL: KW_TAAATA40NTAT_4: NNCCCCCTGCTGTGN-m1!!: VR: 9266: QS: 97-0: Sg: 149223: Bk: 305786: Znf_C2H2+Methylated Oligos: Maybe tiny selection: MethylMinus ??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_8




ZNF140: FL: KW_TTGCGG40NACA_3b0: CCCAGAGGTA-m1: VR: 143: QS: 94-0.2: Sg: 349237: Bk: 290736: krueppel_box+Znf_C2H2+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_9




NFYC: FL: KW_TCCAGC40NGGC_4: AA-m1: VR: 0: QS: -: Sg: 206751: Bk: 332629: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_10




ZBTB12: FL: KW_TATACG40NCGA_4: AA-m1: VR: 0: QS: -: Sg: 248321: Bk: 368154: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 3 3 4 4 1 1 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_11




MYCN: FL: KW_TCACGA40NTTA_4: AA-m1: VR: 0: QS: -: Sg: 275018: Bk: 426114: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_12




BOLA1: FL: KW_TTCACG40NAGT_4b0: NNACNTCCCTGTNN-m1: VR: 216: QS: 89-0.2: Sg: 316962: Bk: 196169: 0+Methylated Oligos: Selection against CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_13




KRTAP5-9: FL: KW_TTATGA40NCAG_4: AA-m1: VR: 0: QS: -: Sg: 79262: Bk: 115094: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_14




RHOXF1: FL: KW_TCCGCT40NGCG_4: TTGATCC-m1!!: VR: 27768: QS: 99-0: Sg: 215794: Bk: 345699: homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_15




HESX1: FL: KW_TCCGAA40NGGC_4: TAATTAATTA-m1!!: VR: 799: QS: 95-0.1: Sg: 227796: Bk: 281477: homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_16




ZBED3: FL: KW_TCAGCG40NATG_4: AA-m1: VR: 0: QS: -: Sg: 290826: Bk: 357656: Znf_BED+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_17




LASS6: FL: KW_TCGGTA40NTGA_4: AA-m1: VR: 0: QS: -: Sg: 30611: Bk: 97055: homeodomain+Methylated Oligos: Fail: a.s. 3 3 4 3 3 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_18




LHX9: FL: KW_TCGTGC40NACC_4: TCGTTAW-m1!!: VR: 15994: QS: 100-0.1: Sg: 280973: Bk: 341790: homeodomain+Methylated Oligos: TCGTTA is selected against TAATTA: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_19




LHX9: FL: KW_TCGTGC40NACC_4: CTAATTAR-m1!!: VR: 11941: QS: 94-0.1: Sg: 280973: Bk: 341790: homeodomain+Methylated Oligos: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_20




LHX5: FL: KW_TATAGC40NGAC_4: TCGTTA-m1: VR: 11830: QS: 99-0.1: Sg: 361263: Bk: 492973: homeodomain+Methylated Oligos: TCGTTA is selected against TAATTA: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_21




LHX5: FL: KW_TATAGC40NGAC_4: TAATTA-m1: VR: 12318: QS: 98-0.1: Sg: 361263: Bk: 492973: homeodomain+Methylated Oligos: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_22




ZNF763: FL: KW_TACGCA40NAAT_4: AA-m1: VR: 0: QS: -: Sg: 336696: Bk: 384799: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_23




FOXP3: FL: KW_TGCTAT40NCAG_4: AA-m1: VR: 0: QS: -: Sg: 309233: Bk: 376308: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_24




ZBP1: FL: KW_TCCCAT40NTGT_4: CGCGCGCGCG-m1!!: VR: 16924: QS: 88-0.3: Sg: 248479: Bk: 260937: 0+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_25




ZFP2: FL: KW_TCATAC40NTTA_4b0: GCCCYNRGGGC-m1!!: VR: 194: QS: 83-0.1: Sg: 347098: Bk: 236623: Znf_C2H2+Methylated Oligos: New motif or non-specific site ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_26




BATF3: FL: KW_TAACGC40NGTG_4: RTGACGTCAY-m1!!: VR: 490: QS: 97-0.2: Sg: 9974: Bk: 17890: bZIP+Methylated Oligos: Doesn't care about CG methylation: MethylPlusa.s. 3 3 4 4 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_27




FERD3L: FL: KW_TAGCTT40NGAC_4: GYAACAGCTGTTRC-m1!!: VR: 7478: QS: 100-0: Sg: 210951: Bk: 308676: bHLH+Methylated Oligos: Neutral : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_28




TGIF2LY: FL: KW_TAACCT40NCGG_4: TGTCANNNNTGACA-m1!!: VR: 68: QS: 94-0.3: Sg: 217973: Bk: 235091: MEIS+Methylated Oligos: Neutral, bit weak: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_29




ASCL2: FL: KW_TAAGTT40NGAT_4b0: RCAGCTGY-m1!!: VR: 17268: QS: 96-0: Sg: 267868: Bk: 798432: bHLH+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_30




MIXL1: FL: KW_TATAGT40NAGG_4: TAATTNAATTA-m1!!: VR: 32744: QS: 100-0: Sg: 243536: Bk: 275332: homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_31




TGIF2LX: FL: KW_TCTTGC40NTTC_4: TGACANNTGTCA-m1!!: VR: 75478: QS: 99-0: Sg: 256084: Bk: 379680: MEIS+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_32




ISX: FL: KW_TTTGCG40NGCT_4: YTAATTAR-m1!!: VR: 15392: QS: 100-0.1: Sg: 337652: Bk: 323409: homeodomain+Methylated Oligos: this motif is neutral, but there is one new motif with methylated CG site: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_33




ISX: FL: KW_TTTGCG40NGCT_4: NNGYTCGTTANN-m1!!: VR: 3193: QS: 92-0.1: Sg: 337652: Bk: 323409: homeodomain+Methylated Oligos: New motif only present on methylated ligands: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_34




TFAM: FL: KW_TTGACT40NAGT_4: AA-m1: VR: 0: QS: -: Sg: 257069: Bk: 265128: HMG+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_35




LYL1: FL: KW_TGGCAG40NCCT_4: AA-m1: VR: 0: QS: -: Sg: 246860: Bk: 277074: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_36




ZNF491: FL: KW_TCCCAA40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 253581: Bk: 301134: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_37




ZNF485: FL: KW_TGCGGC40NAGT_4: NNCGCGACCACCNN-m1!!: VR: 155: QS: 88-0.3: Sg: 250573: Bk: 284803: krueppel_box+Znf_C2H2+Methylated Oligos: Doesn't care about CG methylation: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_38




TFAP2E: FL: KW_TGTGGG40NAAC_4: TGCCCYNAGGC-m1!!: VR: 19060: QS: 100-0: Sg: 242920: Bk: 318429: TFAP+Methylated Oligos: Tiny selection to methylated CG site: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_39




SOX3: FL: KW_TTTGCT40NCGT_4: AACAATRG-m1!!: VR: 11153: QS: 100-0: Sg: 74516: Bk: 121137: HMG+Methylated Oligos: Neutral: a.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_40




ONECUT1: FL: KW_TGGCCG40NGCT_4: KTATTGATCCRT-m1!!: VR: 4504: QS: 100-0: Sg: 192798: Bk: 262532: CUT+Methylated Oligos: Selection against methylated CG site. There is also another very strong binding motif: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_41




ONECUT1: FL: KW_TGGCCG40NGCT_4: KTATTGATTTT-m1: VR: 8941: QS: 100-0: Sg: 192798: Bk: 262532: CUT+Methylated Oligos: New motif present on methylated oligos: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_42




CREBL2: FL: KW_TACTCC40NGTA_4: AA-m1: VR: 0: QS: -: Sg: 155510: Bk: 228188: bZIP+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_43




MRPS17: FL: KW_TGGAGG40NCCT_4: AA-m1: VR: 0: QS: -: Sg: 205579: Bk: 266434: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_44




NHLH2: FL: KW_TTAGAT40NGTG_4: GGRCGCAGCTGNKNCC-m1!!: VR: 11271: QS: 100-0: Sg: 245532: Bk: 276339: bHLH+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_45




ZNF428: FL: KW_TACCTG40NACG_4: AA-m1: VR: 0: QS: -: Sg: 246600: Bk: 297176: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_46




ZNF396: FL: KW_TTTAGA40NGGC_4b0: NNTGTMCGAAANN-m1!!: VR: 2789: QS: 99-0.4: Sg: 234798: Bk: 339565: SCAN+znf_C2H2+Methylated Oligos: Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_47




ZSCAN1: FL: KW_TTAGGC40NATA_4: AA-m1: VR: 0: QS: -: Sg: 227433: Bk: 246376: SCAN+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_48




FOXD4L6: FL: KW_TTATAA40NGTG_4: AA-m1: VR: 0: QS: -: Sg: 245564: Bk: 296155: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_49




IRX3: DBD: KW_TCGCAA40NTGT_4: AA-m1: VR: 0: QS: -: Sg: 274484: Bk: 330467: homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_50




ZNF645: FL: KW_TAACCA40NGGT_4: AA-m1: VR: 0: QS: -: Sg: 272528: Bk: 400888: znf_RING+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_51




ZNF645: FL: KW_TGAAAT40NCAA_4: AA-m1: VR: 0: QS: -: Sg: 261175: Bk: 299127: znf_RING+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_52




IRF8: FL: KW_TGCACA40NATA_4: YGAAACNGAAACYR-m1!!: VR: 52343: QS: 100-0: Sg: 308561: Bk: 429895: IRF+Methylated Oligos: Selection against methylated CG sites: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_53




GCM1: FL: KW_TTGCCT40NAAC_4: ATGCTGGTA-m1: VR: 3705: QS: 95-0.1: Sg: 226676: Bk: 325273: GCM+Methylated Oligos: Selection against methylated CG site: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_54




ZFP2: FL: KW_TCTGGA40NGAC_4: AA-m1: VR: 0: QS: -: Sg: 740: Bk: 911: Znf_C2H2+Methylated Oligos: Fail: a.s. 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_55




TRIT1: FL: KW_TATGCA40NGAG_4: AA-m1: VR: 0: QS: -: Sg: 228548: Bk: 284977: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_56




TAL2: FL: KW_TCGACG40NTAA_4: AA-m1: VR: 0: QS: -: Sg: 240245: Bk: 279799: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_57




HAND2: FL: KW_TCCTGT40NGGC_4: AA-m1: VR: 0: QS: -: Sg: 184655: Bk: 242927: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_58




HIST1H1E: FL: KW_TAAGCC40NAGT_4: AA-m1: VR: 0: QS: -: Sg: 80490: Bk: 124347: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_59




NKX2-8: FL: KW_TAACGT40NGAT_4: CACTTGA-m1: VR: 16511: QS: 100-0.1: Sg: 305069: Bk: 348788: homeodomain+Methylated Oligos: Neutral for this motif, but there is one more motif only present on methylated ligands: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_60




NKX2-8: FL: KW_TAACGT40NGAT_4: RWRTCGTTAYTGC-m1!!: VR: 13561: QS: 100-0: Sg: 305069: Bk: 348788: homeodomain+Methylated Oligos: Motif only present on methylated ligands: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_61




PRR3: FL: KW_TTCTCG40NTTC_4: AA-m1: VR: 0: QS: -: Sg: 272301: Bk: 394777: znf_CCCH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_62




PRR3: FL: KW_TTGTCG40NACC_4: AA-m1: VR: 0: QS: -: Sg: 309367: Bk: 348421: znf_CCCH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_63




VENTX: FL: KW_TATGGA40NAGA_4: NNCGCTAATTANN-m1!!: VR: 6096: QS: 91-0.1: Sg: 338953: Bk: 457828: homeodomain+Methylated Oligos: Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_64




ZNF75A: FL: KW_TTGCTG40NCTA_4: GCTTTTCCCACA-m1!!: VR: 5296: QS: 100-0: Sg: 297427: Bk: 330804: krueppel_box+Znf_C2H2+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_65




DBP: FL: KW_TTTAAA40NTAT_4: RTTAYGTAAY-m1!!: VR: 74245: QS: 100-0.1: Sg: 265609: Bk: 358463: bZIP+Methylated Oligos: Selection against methylated CG site: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_66




DLX2: FL: KW_TCACCA40NATG_4: NTAATTAN-m1: VR: 18899: QS: 100-0.1: Sg: 232372: Bk: 256898: homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_67




FAM170A: FL: KW_TGCTAA40NCTG_4: AA-m1: VR: 0: QS: -: Sg: 198177: Bk: 269024: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_68




MEF2B: FL: KW_TGGACG40NAAG_4: CCATATWWGG-m1!!: VR: 24223: QS: 94-0.1: Sg: 227318: Bk: 318544: MADS+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_69




SOX8: FL: KW_TCGACC40NCCT_4: GAACAATGG-m1!!: VR: 10220: QS: 100-0.4: Sg: 192370: Bk: 152368: HMG+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_70




ZNF662: FL: KW_TATACA40NGTC_4: AA-m1: VR: 0: QS: -: Sg: 241751: Bk: 280406: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_71




FOXP3: FL: KW_TTAAGC40NAGT_4: AA-m1: VR: 0: QS: -: Sg: 219435: Bk: 303044: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_72




HMBOX1: FL: KW_TATGGC40NAGC_4: AA-m1: VR: 0: QS: -: Sg: 204539: Bk: 261938: homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_73




DMC1: FL: KW_TAGTGA40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 266942: Bk: 279374: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_74




POU5F1: FL: KW_TCATGT40NCTG_4: AWTATGYTAATKARG-m1!!: VR: 26337: QS: 100-0: Sg: 312790: Bk: 363132: POU+Methylated Oligos: Neutral, there is also another POU+POU motif combination with methylated CG site in the middle: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_75




POU5F1: FL: KW_TCATGT40NCTG_4: WTATGCGCATAW-m1!!: VR: 16955: QS: 100-0: Sg: 312790: Bk: 363132: POU+Methylated Oligos: This motif is more enriched than control: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_76




MBNL2: FL: KW_TCATAA40NAGC_4: NNYGCCTCGCYYNN-m1!!: VR: 2244: QS: 80-0.1: Sg: 318256: Bk: 382530: znf_CCCH+Methylated Oligos: Doesn't care about CG methylatioin: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_77




TBX10: FL: KW_TCTCTA40NCAC_4: AA-m1: VR: 0: QS: -: Sg: 248041: Bk: 313276: TBX+Methylated Oligos: : Forkhead contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_78




EGR3: FL: KW_TGCTTG40NTGC_4: NNCGCCCACGCAN-m1!!: VR: 8163: QS: 100-0.1: Sg: 291344: Bk: 358712: Znf_C2H2+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_79




HOXA13: FL: KW_TGTACG40NCGG_4: CTCGTAAAA-m1: VR: 36994: QS: 100-0: Sg: 222219: Bk: 305331: homeodomain+Methylated Oligos: CTCGTAAAA is more preferred than MATAAA on the methylated ligands: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_80




LMX1B: FL: KW_TTGGAC40NGTG_4b0: TAATTA-m1: VR: 65387: QS: 99-0: Sg: 205279: Bk: 283498: homeodomain+Methylated Oligos: This motif is neutral, but there is another motif with CG site present: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_81




LMX1B: FL: KW_TTGGAC40NGTG_4b0: CTCGTTAA-m1: VR: 9196: QS: 94-0: Sg: 205279: Bk: 283498: homeodomain+Methylated Oligos: New motif only present on the methylated ligands: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_82




TAL2: FL: KW_TATTCT40NCTC_4: AA-m1: VR: 0: QS: -: Sg: 205087: Bk: 271671: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_83




CREBL2: FL: KW_TCTAGT40NAAC_4u: CTAGTTA-m1: VR: 3934: QS: 99-0.2: Sg: 205255: Bk: 283178: bZIP+Methylated Oligos: : Contamination ??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_84




NANOG: FL: KW_TGTCTC40NTCA_4: AA-m1: VR: 0: QS: -: Sg: 223675: Bk: 308411: homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_85




ZFP42: FL: KW_TTAGGT40NTAA_4: GGTCAAAGGTC-m1!!: VR: 947: QS: 84-0.1: Sg: 273351: Bk: 416086: Znf_C2H2+Methylated Oligos: : Nuclear receptor contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_86




IKZF5: FL: KW_TATGAG40NCGT_4: AA-m1: VR: 0: QS: -: Sg: 190900: Bk: 227262: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_87




ATOH7: FL: KW_TAGGCC40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 244145: Bk: 304506: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_88




ZNF672: FL: KW_TTCGAA40NGAC_4: AA-m1: VR: 0: QS: -: Sg: 27735: Bk: 273619: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_89




ZSCAN16: FL: KW_TGGGCT40NGTT_4: AGGTGTTCTGTTAACANN-m1!!: VR: 41312: QS: 100-0: Sg: 272520: Bk: 406570: SCAN+znf_C2H2+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_90




FOXL2: FL: KW_TAACTG40NGTA_4b0: CGTAAACA-m1!!: VR: 5715: QS: 69-0: Sg: 44787: Bk: 251565: forkhead+Methylated Oligos: Extremely weak. Neutral: a.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_91




FOXI1: FL: KW_TTATGG40NCCA_4b0: ANGTAAACAA-m1!!: VR: 485: QS: 94-0.3: Sg: 338378: Bk: 209866: forkhead+Methylated Oligos: Weak motif. Neutral ?: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_92




RARG: FL: KW_TAAATC40NGTT_4: AGGTCAN-m1: VR: 16355: QS: 99-0.2: Sg: 315289: Bk: 414676: nuclear receptor+Methylated Oligos: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_93




ZNF669: FL: KW_TTTGCC40NTGA_4: AA-m1: VR: 0: QS: -: Sg: 227739: Bk: 320262: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_94




ZIC3: FL: KW_TCTTCG40NGAT_4: RCCCCCTGCTG-m1!!: VR: 13365: QS: 100-0.1: Sg: 193035: Bk: 338557: Znf_C2H2+Methylated Oligos: Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_95




THAP8: FL: KW_TTGAAG40NCTC_4: AA-m1: VR: 0: QS: -: Sg: 242084: Bk: 348096: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_96




EMX1: FL: KW_TAAGAT40NATG_4: GSTAATTANN-m1!!: VR: 36980: QS: 100-0.2: Sg: 351400: Bk: 534020: homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_97




FOXR1: FL: KW_TGTGAC40NGTC_4: AA-m1: VR: 0: QS: -: Sg: 247227: Bk: 375391: forkhead +Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_98




ZNF124: FL: KW_TAGCAT40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 284161: Bk: 385197: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_99




FOXJ3: DBD: KW_TCCTCT40NGTC_4: CGTAAACA-m1: VR: 896: QS: 91-0.1: Sg: 249190: Bk: 7289: forkhead+Methylated Oligos: This motif is selected against other motif: MethylPlusa.s. 3 3 4 4 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_100




DRAP1: DBD: KW_TGAGAA40NGCG_4: AA-m1!!: VR: 0: QS: -: Sg: 309696: Bk: 435713: CBFA_NFYB_domain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_101




CCDC16: DBD: KW_TGGCAC40NAAG_4: NNACRTCCMTGTNN-m1!!: VR: 697: QS: 97-0.2: Sg: 309388: Bk: 450858: Znf_C2H2+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_102




ALX4: DBD: KW_TGCGTA40NTCA_4: TAATTA-m1: VR: 17682: QS: 93-0.1: Sg: 344596: Bk: 570092: Homeobox+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_103




MEF2D: DBD: KW_TGCGTC40NTTA_4: CCWWWWWWGG-m1!!: VR: 30670: QS: 88-0.1: Sg: 337275: Bk: 476661: TF_MADSbox+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_104




ZNF580: FL: KW_TCACTT40NTTG_4: AGGGTAGGNRN-m1!!: VR: 5038: QS: 99-0.3: Sg: 237892: Bk: 339915: Znf_C2H2+Methylated Oligos: New motif or non-specific motif ?: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_105




DLX3: FL: KW_TAGTCT40NGCA_4: TAATTA-m1: VR: 16696: QS: 99-0.2: Sg: 245565: Bk: 372991: Homeodomain+Methylated Oligos: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_106




NKX2-5: FL: KW_TGGGTG40NGGA_4: NCCACTTRAN-m1!!: VR: 31423: QS: 100-0: Sg: 211718: Bk: 295462: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_107




FOXS1: FL: KW_TAAGCT40NTGC_4: AA-m1: VR: 0: QS: -: Sg: 196124: Bk: 262336: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_108




ZNF24: FL: KW_TCGGGA40NGCA_4: AA-m1: VR: 0: QS: -: Sg: 185676: Bk: 236327: SCAN+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_109




MYCL1: FL: KW_TGACGC40NCAC_4: AA-m1: VR: 0: QS: -: Sg: 179435: Bk: 217903: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_110




ZNF706: FL: KW_TTGAAT40NTAC_4: AA-m1: VR: 0: QS: -: Sg: 221821: Bk: 306760: zinc finge+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_111




ZNF556: FL: KW_TTAAAC40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 193155: Bk: 366531: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_112




DRAP1: FL: KW_TCCACA40NGCC_4: AA-m1: VR: 0: QS: -: Sg: 217776: Bk: 324304: CBFA_NFYB_domain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_113




HLF: FL: KW_TAAACG40NGCC_4: TTRCGYAA-m1!!: VR: 15458: QS: 79-0: Sg: 239294: Bk: 371069: bZIP_1+Methylated Oligos: Doesn't care about CG methylation. There is also the other direction homodimer.: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_114




HLF: FL: KW_TAAACG40NGCC_4: CGTAANNNNNNNNNNNNNTTACG-m1!!: VR: 337: QS: 88-0.2: Sg: 239294: Bk: 371069: bZIP_1+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_115




NFE2: FL: KW_TCCGTC40NGTT_4: AA-m1: VR: 0: QS: -: Sg: 221733: Bk: 298104: bZIP_1+Methylated Oligos: Fail, but control is ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_116




ATOH7: FL: KW_TTGTTT40NGGC_4: AA-m1: VR: 0: QS: -: Sg: 217634: Bk: 321943: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_117




ZNF597: FL: KW_TACGGC40NAGT_4: GGCSGCCATYTTG-m1!!: VR: 17993: QS: 100-0: Sg: 195405: Bk: 271821: krueppel_box+Znf_C2H2+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_118




HOXD3: FL: KW_TGAGGG40NCTT_4: CTAATKAC-m1!!: VR: 27852: QS: 100-0.1: Sg: 170201: Bk: 281341: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_119




ZBTB25: FL: KW_TGAAGA40NATG_4: AA-m1: VR: 0: QS: -: Sg: 175437: Bk: 267654: BTB+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_120




PKNOX1: FL: KW_TCGTCC40NGCC_4b0: NNTGACANNTGTCANN-m1!!: VR: 21236: QS: 99-0.1: Sg: 206654: Bk: 181361: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_121




SIX2: FL: KW_TACTTT40NTCT_4: AA-m1: VR: 0: QS: -: Sg: 192585: Bk: 244159: Homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_122




ESRRG: FL: KW_TGACCA40NTCC_4: TCAAGGTCR-m1!!: VR: 20616: QS: 99-0: Sg: 234644: Bk: 285637: nuclear receptor+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_123




ZNF474: FL: KW_TCATTC40NATT_4: AA-m1: VR: 0: QS: -: Sg: 145268: Bk: 143011: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_124




PBX1: FL: KW_TTGTTC40NAAG_4b0: RTCAATCA-m1!!: VR: 731: QS: 88-0.2: Sg: 207901: Bk: 215347: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_125




POLE4: FL: KW_TGTGCG40NTAG_4: AA-m1: VR: 0: QS: -: Sg: 144209: Bk: 232482: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_126




CSDC2: FL: KW_TAGCCA40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 12670: Bk: 51724: CSP_DNA-bd+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_127




ZNF428: FL: KW_TGGTCC40NTTC_4: AA-m1: VR: 0: QS: -: Sg: 176379: Bk: 285403: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_128




C17orf49: FL: KW_TCAGCC40NTTC_4: AA-m1: VR: 0: QS: -: Sg: 174419: Bk: 308926: Homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_129




NEUROG3: FL: KW_TCTAGA40NCGA_4: AA-m1: VR: 0: QS: -: Sg: 174721: Bk: 286248: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_130




HAND1: FL: KW_TCGGCG40NACG_4: AA-m1: VR: 0: QS: -: Sg: 189033: Bk: 240035: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_131




HMX2: FL: KW_TGAATC40NGTA_4: CCAMTTAA-m1!!: VR: 6938: QS: 99-0.1: Sg: 205317: Bk: 325495: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_132




FOXR1: FL: KW_TACTGT40NCGC_4: AA-m1: VR: 0: QS: -: Sg: 153266: Bk: 233309: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_133




FOXB1: FL: KW_TGGCTG40NAGA_4: AA-m1: VR: 0: QS: -: Sg: 236624: Bk: 307196: forkhead +Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_134




ZNF396: FL: KW_TGTAAG40NACT_4: AA-m1: VR: 0: QS: -: Sg: 167206: Bk: 217640: SCAN+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_135




POU5F1: FL: KW_TTGTCT40NGCT_4: AWTATGYTAATKARG-m1!!: VR: 27875: QS: 100-0: Sg: 210967: Bk: 304692: POU+Methylated Oligos: Neutral, there is also another POU+POU motif combination with methylated CG site in the middle: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_136




POU5F1: FL: KW_TTGTCT40NGCT_4: TATGCGCATA-m1: VR: 3884: QS: 100-0.2: Sg: 210967: Bk: 304692: POU+Methylated Oligos: This motif is more enriched than control: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_137




PBX4: FL: KW_TTCATT40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 180673: Bk: 311539: Homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_138




TEAD1: FL: KW_TTCTAA40NAAT_4: YRCATWCC-m1!!: VR: 17429: QS: 100-0.1: Sg: 196791: Bk: 259121: TEA+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_139




BARX1: FL: KW_TGCCAC40NGCC_4: AA-m1: VR: 0: QS: -: Sg: 210400: Bk: 344761: Homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_140




OVOL2: FL: KW_TATGTC40NGGA_4: AA-m1: VR: 0: QS: -: Sg: 187386: Bk: 305735: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_141




RHOXF2: FL: KW_TCCCGT40NATG_4: YTAATCC-m1!!: VR: 38489: QS: 100-0.1: Sg: 103583: Bk: 225976: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_142




FOSL2: FL: KW_TCAGGC40NACG_4: AA-m1: VR: 0: QS: -: Sg: 139869: Bk: 213509: bZIP+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_143




ATF4: FL: KW_TACCGC40NTAC_4b0: ATGAYGTCAT-m1!!: VR: 51: QS: 95-0.4: Sg: 159332: Bk: 133553: bZIP+Methylated Oligos: Selection against methylated CG site. Extremely weak.: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_144




ELF3: FL: KW_TCTAAC40NACC_3b0: NNACCAGGAAGTANNNNNNNNWWWW-m1!!: VR: 2702: QS: 100-0.8: Sg: 217122: Bk: 184949: ETS+Methylated Oligos: Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_145




ZNF174: FL: KW_TCGCAC40NCCT_4: AA-m1: VR: 0: QS: -: Sg: 152274: Bk: 234771: SCAN+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_146




ZNF193: FL: KW_TGGTAC40NTCT_4: AA-m1: VR: 0: QS: -: Sg: 155132: Bk: 236154: SCAN+znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_147




PAX8: FL: KW_TTATAT40NACC_4: AA-m1: VR: 0: QS: -: Sg: 153921: Bk: 226915: PAX+Methylated Oligos: : Nuclear receptor contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_148




ZNF672: FL: KW_TGCAAA40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 182683: Bk: 245152: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_149




RXRA: FL: KW_TGATCG40NATC_4: AA-m1: VR: 0: QS: -: Sg: 193015: Bk: 353845: nuclear receptor+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_150




SMAD5: FL: KW_TCAAAT40NCTG_4: AA-m1: VR: 0: QS: -: Sg: 185588: Bk: 315924: MAD+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_151




DR1: FL: KW_TTACGT40NGGA_4: AA-m1: VR: 0: QS: -: Sg: 170931: Bk: 214446: CBFA_NFYB_domain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_152




ATF3: FL: KW_TGCACC40NAGA_4: RTGAYGTCAY-m1!!: VR: 112015: QS: 100-0: Sg: 229747: Bk: 375183: bZIP+Methylated Oligos: Selection against methyalted CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_153




ELF5: FL: KW_TCTAAA40NCGC_4: ANNAGGAAGTR-m1!!: VR: 24678: QS: 100-0.1: Sg: 221289: Bk: 338702: ETS+Methylated Oligos: Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_154




ELF5: FL: KW_TCTAAA40NCGC_4: ANNAGGAAGNAGGAAGT-m1!!: VR: 14312: QS: 100-0.1: Sg: 221289: Bk: 338702: ETS+Methylated Oligos: This kind of homodimer is selected against other homodimers on the methylated ligands: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_155




MLX: FL: KW_TAGGAC40NACA_4: NNRTCACRTGNNN-m1!!: VR: 16079: QS: 100-0.1: Sg: 206167: Bk: 294973: bHLH+Methylated Oligos: Selection against methylated CG site.: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_156




KLF7: FL: KW_TCAGGT40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 186187: Bk: 262520: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_157




DMRTB1: FL: KW_TGTTAC40NCGC_4: AA-m1: VR: 0: QS: -: Sg: 176984: Bk: 244577: DM_DNA-bd+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_158




CREB3: FL: KW_TGTCCC40NGGT_4: YGCCACRTCAYC-m1!!: VR: 11575: QS: 100-0.1: Sg: 170425: Bk: 269588: bZIP+Methylated Oligos: Primary motif. Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_159




CREB3: FL: KW_TGTCCC40NGGT_4: RTGAYGTCAY-m1!!: VR: 9493: QS: 99-0.1: Sg: 170425: Bk: 269588: bZIP+Methylated Oligos: Secondary motif. Selection against methylated CG site: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_160




KLF15: FL: KW_TGTCTT40NTTC_4: NCCMCGCCCMC-m1!!: VR: 10615: QS: 100-0.3: Sg: 182652: Bk: 231119: Znf_C2H2+Methylated Oligos: Might be methyalted CG site is preferred.: MethylPlus ?a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_161




ZNF557: FL: KW_TGTACT40NCAG_4: AA-m1: VR: 0: QS: -: Sg: 204284: Bk: 283317: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_162




HOXA3: FL: KW_TAGTCG40NAGA_4: AA-m1: VR: 0: QS: -: Sg: 67621: Bk: 263188: Homeodomain+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_163




NR5A1: FL: KW_TCCTTG40NGGT_4: TCAAGGTCA-m1!!: VR: 17234: QS: 98-0: Sg: 257753: Bk: 440080: nuclear receptor+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_164




LHX8: FL: KW_TTGCGA40NGTA_4: CTCGTTA-m1: VR: 27139: QS: 100-0.1: Sg: 284724: Bk: 372918: Homeodomain+Methylated Oligos: TCGTTA is selected against TAATTA: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_165




LHX8: FL: KW_TTGCGA40NGTA_4: TAATTA-m1: VR: 11459: QS: 94-0.1: Sg: 284724: Bk: 372918: Homeodomain+Methylated Oligos: Secondary motif: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_166




ZSCAN1: FL: KW_TAGTTC40NATC_4: AA-m1: VR: 0: QS: -: Sg: 203613: Bk: 383505: SCAN+znf_C2H2+Methylated Oligos: : bZIP contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_167




E2F3: FL: KW_TCCGGA40NGTC_4: AA-m1: VR: 0: QS: -: Sg: 178247: Bk: 299484: E2F+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_168




ZNF436: FL: KW_TTTACA40NGCT_4b0: CCTCCACCGC-m1!!: VR: 3154: QS: 92-0.3: Sg: 199576: Bk: 301357: krueppel_box+Znf_C2H2+Methylated Oligos: Selection against methylated CG site ?: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_169




ZNF833P: FL: KW_TAGGGA40NCTG_4: AA-m1: VR: 0: QS: -: Sg: 200576: Bk: 286614: zinc finger+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_170




MAFF: FL: KW_TCATCT40NATT_4: TGCTGANTCAGCA-m1!!: VR: 4496: QS: 93-0: Sg: 238379: Bk: 315144: bZIP+Methylated Oligos: Neutral or doesn't care about CG methylation: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_171




CPSF4L: FL: KW_TAAAGA40NTCC_4: AA-m1: VR: 0: QS: -: Sg: 202902: Bk: 264612: Znf_CCCH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_172




BHLHA15: FL: KW_TGCTGA40NATA_4: AA-m1: VR: 0: QS: -: Sg: 17029: Bk: 81525: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_173




ZNF740: FL: KW_TCGTGA40NGTC_4: CCCCCCCCAC-m1: VR: 7480: QS: 100-0.2: Sg: 68444: Bk: 127557: Znf_C2H2+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_174




MYOD1: FL: KW_TGCGAT40NGAT_4: AACAGCTGTT-m1: VR: 6419: QS: 100-0.1: Sg: 220861: Bk: 268438: bHLH+Methylated Oligos: This motif is neutral, but the secondary motif with CG site is killed: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_175




EN2: FL: KW_TACTCG40NCAA_3b0: TAATTR-m1!!: VR: 3541: QS: 89-0.1: Sg: 358135: Bk: 117969: Homeodomain+Methylated Oligos: Weak. Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_176




YOD1: FL: KW_TGTTAG40NACC_4: TTCAAGGTCR-m1!!: VR: 932: QS: 99-0.1: Sg: 217078: Bk: 224309: 0+Methylated Oligos: : ESRR contamination ??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_177




HOXD9: FL: KW_TCTCAT40NTGT_4: RTCGTWAA-m1!!: VR: 22315: QS: 100-0: Sg: 299892: Bk: 400631: Homeodomain+Methylated Oligos: Doesn't care CG methylation or methylated CG site is preferred: Careless or MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_178




HOXD9: FL: KW_TCTCAT40NTGT_4: GYAATWAAA-m1!!: VR: 8512: QS: 97-0: Sg: 299892: Bk: 400631: Homeodomain+Methylated Oligos: Secondary motif: Neutrala.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_179




ZNF781: FL: KW_TACGTA40NATC_4: AA-m1: VR: 0: QS: -: Sg: 189251: Bk: 282493: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_180




FOXL2: FL: KW_TAGTAG40NGTT_4: ACGTAAACAC-m1!!: VR: 1109: QS: 85-0.1: Sg: 27513: Bk: 148817: forkhead+Methylated Oligos: Doesn't care CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_181




FOXI1: FL: KW_TGACTT40NGGT_4: AA-m1: VR: 0: QS: -: Sg: 217699: Bk: 398611: forkhead+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_182




SLC2A4RG: FL: KW_TTAGTG40NACC_4: AA-m1: VR: 0: QS: -: Sg: 157611: Bk: 266796: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_183




SOHLH1: FL: KW_TGTATG40NCGG_4: AA-m1: VR: 0: QS: -: Sg: 141328: Bk: 204948: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_184




ZNF514: FL: KW_TCCTTC40NATT_4: AA-m1: VR: 0: QS: -: Sg: 172861: Bk: 239450: krueppel_box+Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_185




IRX5: DBD: KW_TACTCT40NAAC_4: ACGCGNNNNNNNCGCGT-m1!!: VR: 350: QS: 85-0.1: Sg: 222609: Bk: 328710: Homeobox+Methylated Oligos: ACGNNNNNNNNNNNCGT is selected against ACANNNNNNNNNNNTGT: MethylPlusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_186




WHSC1: DBD: KW_TCCCTA40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 165378: Bk: 104306: Znf_PHD+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_187




NEUROD4: DBD: KW_TGGGTT40NCGT_4: AA-m1: VR: 0: QS: -: Sg: 163406: Bk: 229454: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_188




TCF7L1: DBD: KW_TTGGCA40NTCG_4: CATCGRGRCGCTG-m1!!: VR: 19952: QS: 100-0.1: Sg: 206863: Bk: 246586: HMG+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_189




TCF7L1: DBD: KW_TTGGCA40NTCG_4: ASATCAAAG-m1!!: VR: 1422: QS: 100-0.4: Sg: 206863: Bk: 246586: HMG+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_190




CEBPG: DBD: KW_TTGATC40NGCT_4: TTRCGCAA-m1!!: VR: 22488: QS: 93-0: Sg: 273262: Bk: 324777: bZIP+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_191




KLF6: DBD: KW_TGCATG40NATG_4: GCCACGCCC-m1: VR: 17474: QS: 100-0.2: Sg: 221794: Bk: 375857: 0+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_192




MYCL1: DBD: KW_TTAACC40NCTA_4: AA-m1: VR: 0: QS: -: Sg: 196541: Bk: 242915: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_193




ID3: DBD: KW_TGAACA40NAAT_4: AA-m1: VR: 0: QS: -: Sg: 209102: Bk: 299899: bHLH+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_194




DDIT3: DBD: KW_TGCCCG40NCTG_4: AA-m1: VR: 0: QS: -: Sg: 102138: Bk: 119606: Tubby_N+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_195




ZNF564: DBD: KW_TTGGCG40NGCC_4: ACATCGRGRCGCTGW-m1!!: VR: 22950: QS: 100-0.1: Sg: 210896: Bk: 264446: krueppel_box+Znf_C2H2+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_196




BATF3: DBD: KW_TGACCG40NGCT_4: RTGAYGTCAY-m1!!: VR: 347: QS: 96-0.1: Sg: 158596: Bk: 237224: bZIP_1+Methylated Oligos: Tiny selection.: MethylMinus ??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_197




ZNF595: FL: KW_TACAAG40NTCC_4: AA-m1: VR: 0: QS: -: Sg: 37832: Bk: 61705: krueppel_box+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_198




IGHM: FL: KW_TCTACC40NTAG_4: AA-m1: VR: 0: QS: -: Sg: 136552: Bk: 193482: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_199




ELF1: FL: KW_TATGAC40NTCA_4: AACCMGGAAGT-m1!!: VR: 39367: QS: 100-0: Sg: 216193: Bk: 344370: ETS+Methylated Oligos: AG is selected against CG in the middle of the binding motif: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_200




ZNF704: DBD: KW_TGCGGT40NTCA_4: AA-m1: VR: 0: QS: -: Sg: 179284: Bk: 272170: Znf_C2H2+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_201




ZNF503: DBD: KW_TGGTTT40NTTA_4: AA-m1: VR: 0: QS: -: Sg: 179068: Bk: 247250: Znf_C2H2+Methylated Oligos: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_202




PHF20: DBD: KW_TCTATA40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 199736: Bk: 315524: 0+Methylated Oligos: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_203




SPDEF: DBD: KW_TCACGG40NTGT_4: AMCMGGATGTN-m1!!: VR: 55655: QS: 100-0.1: Sg: 283504: Bk: 363599: ETS+Methylated Oligos: AG is selected against CG.: MethylMinusa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_204




MYOD1: DBD: KW_TTTCTG40NTAG_4: AACAGCTGTT-m1: VR: 418: QS: 100-0.2: Sg: 209999: Bk: 353159: bHLH+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_205




MYOD1: DBD: KW_TTTCTG40NTAG_4: AACAGCTGTT-m1: VR: 418: QS: 100-0.2: Sg: 209999: Bk: 353159: bHLH+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_206




HES5: DBD: KW_TAACCG40NCAA_4: GRCACGTGYC-m1!!: VR: 11604: QS: 99-0: Sg: 178188: Bk: 312417: bHLH+Methylated Oligos: Doesn't care about CG methylation: Carelessa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_207




NKX6-2: DBD: KW_TAGGCT40NACC_4: NNTCATTAWNN-m1!!: VR: 34209: QS: 99-0.2: Sg: 347569: Bk: 558233: Homeodomain+Methylated Oligos: Neutral: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_208




GATA5: FL: KW_TTAGAG40NCGG_4: NAGATCNNNNNNNNGATAASR-m1!!: VR: 2558: QS: 100-0.1: Sg: 239505: Bk: 287196: GATA: OK: Scondary kind of site in allosteric contexta.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_209




GATA5: FL: KW_TTAGAG40NCGG_4: YRCTGATAACR-m1!!: VR: 5363: QS: 100-0.1: Sg: 239505: Bk: 287196: GATA: OK: secondarya.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_210




FOXJ1: FL: KW_TTGTCC40NTAG_4: AA-m1: VR: 0: QS: -: Sg: 237470: Bk: 236401: forkhead: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_211




NR2F1: FL: KW_TAGAGC40NTAG_4: NRRGGTCAAAGGTCA-m1!!: VR: 32979: QS: 99-0: Sg: 255870: Bk: 281425: nuclear receptor: ok: has plenty of other spacingsa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_212




SMAD7: FL: KW_TCCTCG40NCAG_4: AA-m1: VR: 0: QS: -: Sg: 196545: Bk: 219917: MAD: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_213




RUNX3: FL: KW_TCTGCT40NTGT_4b0: ACCGCANNNACCGCA-m1!!: VR: 122670: QS: 100-0.7: Sg: 329227: Bk: 153162: RUNX: : a.s. 2 2 3 3 2 2 3 3 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_214




E2F1: FL: KW_TTCGCC40NGAC_4: TTTGGCGCCAAA-m1!!: VR: 1294: QS: 99-0: Sg: 277409: Bk: 247541: E2F: Ok: a.s. 1 1 2 2 3 3 4 1 1 2 2 3 3 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_215




ZIC1: FL: KW_TTTATT40NATC_4: NRCCCCCCGCTGYGN-m1!!: VR: 6140: QS: 98-0.1: Sg: 226645: Bk: 241679: Znf_C2H2: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_216




ZNF140: FL: KW_TCTTTA40NGGA_3b0: CCCAGAGGTA-m1: VR: 130: QS: 98-0.2: Sg: 295464: Bk: 219040: krueppel_box+Znf_C2H2: New motif ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_217




NFYC: FL: KW_TGGACC40NAAC_4: AA-m1: VR: 0: QS: -: Sg: 212112: Bk: 246418: NFY: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_218




ZBTB12: FL: KW_TCTTGG40NTTA_4: AA-m1: VR: 0: QS: -: Sg: 254323: Bk: 281337: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_219




MYCN: FL: KW_TGACCC40NGAA_4: GCGTCGTGT-m1!!: VR: 822: QS: 91-0.2: Sg: 218425: Bk: 305227: bHLH: maybe: odd sitea.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_220




BOLA1: FL: KW_TGCTCT40NTTA_4: ACGTCCHTGT-m1!!: VR: 667: QS: 99-0.2: Sg: 252748: Bk: 298694: 0: New motif ??: Nobody knows whether this protein is a transcription factora.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_221




KRTAP5-9: FL: KW_TACCCT40NTTA_4: AA-m1: VR: 0: QS: -: Sg: 214638: Bk: 185808: 0: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_222




RHOXF1: FL: KW_TAGACA40NGTC_4: TTGATCC-m1!!: VR: 26649: QS: 99-0: Sg: 274258: Bk: 317813: homeodomain: ok, G is more selected than previous motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_223




HESX1: FL: KW_TCGCTA40NTCG_4: TAATTAATTA-m1: VR: 493: QS: 96-0.2: Sg: 240056: Bk: 277034: homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_224




ZBED3: FL: KW_TGAAGC40NCTA_4: ACACGACG-m1: VR: 2089: QS: 89-0.1: Sg: 208043: Bk: 243063: Znf_BED: New motif ?? there is also secondary motif: similar to SREBF2 secondary motif. Also see this kind of motif in ASCL2 in this batcha.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_225




ZBED3: FL: KW_TGAAGC40NCTA_4: CACCGAACAC-m1: VR: 314: QS: 93-0.3: Sg: 208043: Bk: 243063: Znf_BED: New motif ?? Secondary motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_226




LASS6: FL: KW_TTTCAA40NTGA_4: AA-m1: VR: 0: QS: -: Sg: 2615: Bk: 4748: homeodomain: Fail: a.s. 3 4 3 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_227




LHX9: FL: KW_TTTGGT40NCTT_4: CTAATTAR-m1: VR: 7475: QS: 96-0.2: Sg: 290202: Bk: 243969: homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_228




LHX5: FL: KW_TTCTTG40NTGC_4: TAATTA-m1: VR: 7573: QS: 100-0.4: Sg: 347762: Bk: 319185: homeodomain: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_229




ZNF763: FL: KW_TGTGCA40NCCG_4: AA-m1: VR: 0: QS: -: Sg: 218852: Bk: 215689: krueppel_box+Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_230




FOXP3: FL: KW_TGAGAG40NCGC_4: AA-m1: VR: 0: QS: -: Sg: 243526: Bk: 251404: forkhead: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_231




ZBP1: FL: KW_TAGCGT40NTCA_4: CGCGCGCGCG-m1: VR: 14946: QS: 81-0.1: Sg: 315633: Bk: 323637: 0: New motif ?? Vert cool motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_232




ZFP2: FL: KW_TTTCAT40NGCA_4: AA-m1: VR: 0: QS: -: Sg: 258677: Bk: 247786: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_233




BATF3: FL: KW_TGTGAT40NGCA_4u: TGACGTCA-m1: VR: 4266: QS: 99-0.1: Sg: 10790: Bk: 60201: bZIP: ok: a.s. 3 3 4 4 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_234




FERD3L: FL: KW_TAAATT40NCTG_4: GYAACAGCTGTTRC-m1!!: VR: 10452: QS: 99-0: Sg: 209787: Bk: 225655: bHLH: New motif ??: A really freaky looking bHLHa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_235




TGIF2LY: FL: KW_TTAACA40NTGT_4u: TGTCANNNNTGACA-m1: VR: 53: QS: 96-0.5: Sg: 259803: Bk: 277804: MEIS: New motif, bit weak: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_236




ASCL2: FL: KW_TGTCTG40NAGG_4b0: NGCAGCTGCN-m1!!: VR: 841: QS: 93-0: Sg: 233980: Bk: 138603: bHLH: weak: somewhat flat enrichment and weak signala.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_237




MIXL1: FL: KW_TTAAGT40NCCT_4: TAATCNAATTA-m1!!: VR: 35766: QS: 100-0: Sg: 270077: Bk: 292276: homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_238




TGIF2LX: FL: KW_TCGCCC40NCAT_4: TGACANNTGTCA-m1!!: VR: 23315: QS: 97-0: Sg: 298214: Bk: 356193: MEIS: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_239




ISX: FL: KW_TTCAAG40NGCC_4: YTAATTAR-m1!!: VR: 12827: QS: 100-0.2: Sg: 290475: Bk: 286935: homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_240




TFAM: FL: KW_TCGGGC40NAAT_4: AA-m1: VR: 0: QS: -: Sg: 230216: Bk: 230701: HMG: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_241




LYL1: FL: KW_TGGCCT40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 178145: Bk: 141933: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_242




ZNF491: FL: KW_TCCGGG40NCTC_4: GCCGACTCCC-m1!!: VR: 460: QS: 94-0.3: Sg: 198714: Bk: 232383: Znf_C2H2: New motif ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_243




ZNF485: FL: KW_TGCATT40NCCT_4: CGCGACCACC-m1!!: VR: 228: QS: 94-0.4: Sg: 193357: Bk: 231618: krueppel_box+Znf_C2H2: New motif or non-specific binding site: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_244




TFAP2E: FL: KW_TCAAAC40NAAC_4: TGCCCYNAGGC-m1!!: VR: 17123: QS: 100-0.1: Sg: 318387: Bk: 370321: TFAP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_245




SOX3: FL: KW_TGAGGA40NTTG_4: GAACAATG-m1!!: VR: 2671: QS: 91-0.2: Sg: 12829: Bk: 78978: HMG: weak: most of the signal is in hairpinsa.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_246




ONECUT1: FL: KW_TCAGGG40NGCA_4: TATCGATCG-m1: VR: 19040: QS: 100-0.1: Sg: 200820: Bk: 227318: CUT: ok: where is the A-stack???a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_247




CREBL2: FL: KW_TGCAGC40NATT_4: CGATAATTAC-m1: VR: 737: QS: 98-0.2: Sg: 423327: Bk: 410076: bZIP: contaminated: some homeodomaina.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_248




MRPS17: FL: KW_TATGCT40NACT_4: AA-m1: VR: 0: QS: -: Sg: 286578: Bk: 317524: 0: : Homeodomain contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_249




NHLH2: FL: KW_TTAGTA40NCTC_4: GNCGCAGCTGCGNC-m1!!: VR: 14061: QS: 100-0: Sg: 195969: Bk: 228335: bHLH: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_250




ZNF428: FL: KW_TGAATG40NTAG_4: AA-m1: VR: 0: QS: -: Sg: 186139: Bk: 222719: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_251




ZNF396: FL: KW_TTAAAT40NAAT_4: NTGTMCGAAAN-m1!!: VR: 21937: QS: 100-0.2: Sg: 213451: Bk: 234553: SCAN+znf_C2H2: New motif ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_252




ZSCAN1: FL: KW_TGTAGA40NTGT_4: AA-m1: VR: 0: QS: -: Sg: 177894: Bk: 199115: SCAN+znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_253




FOXD4L6: FL: KW_TCTTGT40NCAG_4: AA-m1: VR: 0: QS: -: Sg: 11258: Bk: 11169: forkhead: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_254




IRX3: DBD: KW_TGAGCG40NTTG_4: AA-m1: VR: 0: QS: -: Sg: 174932: Bk: 173045: homeodomain: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_255




ZNF645: FL: KW_TTCGTT40NGCC_4: AA-m1: VR: 0: QS: -: Sg: 219861: Bk: 286374: znf_RING+znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_256




ZNF645: FL: KW_TTAGCT40NCCT_4: AA-m1: VR: 0: QS: -: Sg: 228014: Bk: 312018: znf_RING+znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_257




IRF8: FL: KW_TAAAGT40NAGC_4: YGAAACNGAAACYR-m1!!: VR: 69826: QS: 100-0.1: Sg: 292071: Bk: 357586: IRF: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_258




GCM1: FL: KW_TGAACT40NAAG_4: ATGCGGGTA-m1!!: VR: 31436: QS: 100-0.1: Sg: 277398: Bk: 372046: GCM: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_259




ZFP2: FL: KW_TTGTAA40NTCA_4: AA-m1: VR: 0: QS: -: Sg: 220017: Bk: 280582: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_260




TRIT1: FL: KW_TGAGGT40NTCC_4: AA-m1: VR: 0: QS: -: Sg: 195602: Bk: 256801: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_261




TAL2: FL: KW_TAGCAA40NCGA_4: AA-m1: VR: 0: QS: -: Sg: 133174: Bk: 87856: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_262




HAND2: FL: KW_TCAAGA40NCGC_4: AA-m1: VR: 0: QS: -: Sg: 186028: Bk: 244580: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_263




HIST1H1E: FL: KW_TTACTA40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 129234: Bk: 207573: 0: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_264




NKX2-8: FL: KW_TTGTTA40NGGT_3b0: CCACTTGA-m1!!: VR: 12696: QS: 96-0: Sg: 373784: Bk: 195109: homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_265




PRR3: FL: KW_TCGTCA40NCTA_4: AA-m1: VR: 0: QS: -: Sg: 240008: Bk: 129232: znf_CCCH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_266




PRR3: FL: KW_TGTATA40NGGT_4: AA-m1: VR: 0: QS: -: Sg: 426243: Bk: 384957: znf_CCCH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_267




VENTX: FL: KW_TATTTG40NCCA_4: CGATAATCG-m1!!: VR: 11295: QS: 96-0: Sg: 403240: Bk: 484816: homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_268




ZNF75A: FL: KW_TAACTC40NGTC_4: GCTTTTCCCACA-m1!!: VR: 549: QS: 100-0.1: Sg: 333375: Bk: 360797: krueppel_box+Znf_C2H2: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_269




DBP: FL: KW_TGGCGT40NCCT_4: NTTACGTAAN-m1!!: VR: 104086: QS: 100-0.1: Sg: 389278: Bk: 526150: bZIP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_270




DLX2: FL: KW_TGGGAG40NAGG_4: CGNTAATTAN-m1!!: VR: 2505: QS: 100-0.1: Sg: 54430: Bk: 111604: homeodomain: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_271




FAM170A: FL: KW_TAAGTG40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 210104: Bk: 254122: 0: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_272




MEF2B: FL: KW_TTAGCA40NGGT_4: CCATATWWGG-m1!!: VR: 3331: QS: 95-0.2: Sg: 280350: Bk: 309880: MADS: maybe: Looks more like related SRF than the previous MEF-experiments, could be bacterial expression related feature???a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_273




SOX8: FL: KW_TCGGCT40NTAA_4: GAACAATGG-m1: VR: 21545: QS: 100-0.4: Sg: 170090: Bk: 237903: HMG: weak: mostly hairpina.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_274




SOX8: FL: KW_TCGGCT40NTAA_3b0: GAACANNNNNNNNNCACAC-m1!!: VR: 667: QS: 95-0.1: Sg: 237903: Bk: 197208: HMG: weak: dimer in allosteric context?a.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_275




ZNF662: FL: KW_TCTCCG40NCGC_4: TGCCGACTCC-m1: VR: 235: QS: 95-0.3: Sg: 276953: Bk: 300095: krueppel_box+Znf_C2H2: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_276




FOXP3: FL: KW_TCTAAG40NTTA_4: AA-m1: VR: 0: QS: -: Sg: 244242: Bk: 324746: forkhead: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_277




HMBOX1: FL: KW_TTGCAA40NGTG_4: AA-m1: VR: 0: QS: -: Sg: 157585: Bk: 83736: homeodomain: fail: no diversitya.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_278




DMC1: FL: KW_TGGTAT40NTGA_4: AA-m1: VR: 0: QS: -: Sg: 63269: Bk: 8608: 0: fail: a.s. 2 2 3 4 4 2 2 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_279




POU5F1: FL: KW_TACGAA40NAGA_4: ATTATGCTAATKARGNN-m1!!: VR: 24149: QS: 100-0: Sg: 341119: Bk: 386109: POU: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_280




MBNL2: FL: KW_TTGAAC40NGCT_4: NNYGCCTCGCYYNN-m1!!: VR: 6188: QS: 85-0.1: Sg: 340990: Bk: 400280: znf_CCCH: New motif ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_281




TBX10: FL: KW_TACCCA40NTGT_4: ATGTAAACAA-m1: VR: 1660: QS: 100-0.5: Sg: 31692: Bk: 33495: TBX: contaminated: some forkheada.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_282




EGR3: FL: KW_TCCATC40NTGA_4: NNCGCCCACGCAN-m1!!: VR: 20629: QS: 100-0.3: Sg: 351198: Bk: 432704: Znf_C2H2: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_283




HOXA13: FL: KW_TTGGGC40NGGC_4: GCTCGTAAAA-m1!!: VR: 35374: QS: 100-0: Sg: 236721: Bk: 262727: homeodomain: ok, there is secondary motif MATAAA: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_284




LMX1B: FL: KW_TGCAGT40NAAG_4b0: TAATTA-m1: VR: 33687: QS: 100-0: Sg: 220849: Bk: 102886: homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_285




TAL2: FL: KW_TTATTC40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 230104: Bk: 275090: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_286




CREBL2: FL: KW_TAGTTA40NGTG_4: ACTAGTTAAC-m1!!: VR: 12580: QS: 93-0: Sg: 327386: Bk: 393331: bZIP: contaminated: Some sort of very peculiar homeodomain?? Should be definitely identified with sequencing or mass-Speca.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_287




NANOG: FL: KW_TCGGGT40NAAG_4: AA-m1: VR: 0: QS: -: Sg: 202207: Bk: 239490: homeodomain: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_288




ZFP42: FL: KW_TCGAGT40NACT_4: RGKNCAAAGTNCAN-m1!!: VR: 2078: QS: 91-0.1: Sg: 278565: Bk: 327651: Znf_C2H2: contaminated: HNF4? or some other nuclear receptor contaminationa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_289




IKZF5: FL: KW_TAGTGC40NATG_4: AA-m1: VR: 0: QS: -: Sg: 235221: Bk: 280003: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_290




ATOH7: FL: KW_TGGTCA40NGTG_4: AA-m1: VR: 0: QS: -: Sg: 32044: Bk: 12753: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_291




ZNF672: FL: KW_TGTCAG40NGAC_4: AA-m1: VR: 0: QS: -: Sg: 15945: Bk: 16156: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_292




ZSCAN16: FL: KW_TGGCTA40NTCC_4: AGGTGTTCTGTTAACANN-m2!!: VR: 51179: QS: 100-0: Sg: 279636: Bk: 308341: SCAN+znf_C2H2: New motif ??: probably correcta.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_293




FOXL2: FL: KW_TTTGAG40NATT_3b0: CGTAAACA-m1!!: VR: 5083: QS: 68-0: Sg: 178743: Bk: 245987: forkhead: New motif. Weak: very weak enrichmenta.s. 2 2 3 3 4 2 2 3 3 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_294




FOXI1: FL: KW_TGCGAG40NTTC_3b0: ANGTAAACAA-m1!!: VR: 125: QS: 100-0.5: Sg: 291574: Bk: 173654: forkhead: weak: very weaka.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_295




RARG: FL: KW_TGTACA40NGTA_4: AGGTCAN-m1: VR: 12560: QS: 100-0.5: Sg: 323668: Bk: 347788: nuclear receptor: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_296




ZNF669: FL: KW_TTCTCA40NCCT_4: AA-m1: VR: 0: QS: -: Sg: 210985: Bk: 78868: krueppel_box+Znf_C2H2: fail: a.s. 3 4 4 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_297




ZIC3: FL: KW_TCAGCA40NCTC_4: CCCCGCTGTG-m1: VR: 2301: QS: 99-0.2: Sg: 213614: Bk: 314737: Znf_C2H2: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_298




THAP8: FL: KW_TACTAC40NGCC_4: AA-m1: VR: 0: QS: -: Sg: 214416: Bk: 235439: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_299




EMX1: FL: KW_TTTAGG40NTCT_4: GSTAATTANN-m1!!: VR: 26624: QS: 99-0: Sg: 274106: Bk: 331001: homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_300




FOXR1: FL: KW_TCGAAT40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 186899: Bk: 264290: forkhead : fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_301




ZNF124: FL: KW_TTCGAG40NGCG_4: AA-m1: VR: 0: QS: -: Sg: 190547: Bk: 211234: krueppel_box+Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_302




FOXJ3: DBD: KW_TACATC40NATA_4: RCGTAAACA-m1!!: VR: 5095: QS: 96-0.2: Sg: 211200: Bk: 49283: forkhead: ok, there is also dimer or trimer binding motif: a.s. 3 3 4 4 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_303




DRAP1: DBD: KW_TACTGA40NACC_4: CGCGTNNNCGTCC-m1!!: VR: 227: QS: 97-0.4: Sg: 254671: Bk: 343670: CBFA_NFYB_domain: Non-specific binding site ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_304




CCDC16: DBD: KW_TGTAGC40NCCT_4: NNACRTCCMTGTNN-m1!!: VR: 628: QS: 98-0.2: Sg: 192392: Bk: 275747: Znf_C2H2: New motif ??: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_305




ALX4: DBD: KW_TCTATT40NCAT_4: TAATTA-m1: VR: 20727: QS: 98-0: Sg: 419426: Bk: 444287: Homeobox: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_306




MEF2D: DBD: KW_TCCAAG40NAAC_4: CCWWWWWWGG-m1!!: VR: 4627: QS: 92-0.1: Sg: 318658: Bk: 400828: TF_MADSbox: ok: MEF-proteins seem to bind systematically to different kind of targets (SRF-like) when expressed from E.Coli, bit flat enrichment and seed needs some worka.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_307




ZNF580: FL: KW_TGAACC40NCCA_4: AA-m1: VR: 0: QS: -: Sg: 251982: Bk: 276983: Znf_C2H2: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_308




DLX3: FL: KW_TGGAGA40NCCA_4: NNTAATTANN-m1!!: VR: 19062: QS: 100-0.1: Sg: 262533: Bk: 317989: Homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_309




NKX2-5: FL: KW_TCCGAG40NTGG_4: NCCACTTRAN-m1: VR: 14672: QS: 99-0: Sg: 294874: Bk: 344194: Homeodomain: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_310




FOXS1: FL: KW_TCGAGG40NGTT_4: AA-m1: VR: 0: QS: -: Sg: 213491: Bk: 257833: forkhead: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_311




ZNF24: FL: KW_TAGACC40NAGT_4: AA-m1: VR: 0: QS: -: Sg: 265695: Bk: 333724: SCAN+znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_312




MYCL1: FL: KW_TCCTCA40NAAC_4: AA-m1: VR: 0: QS: -: Sg: 285537: Bk: 321310: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_313




ZNF706: FL: KW_TCCCTG40NGTA_4: AA-m1: VR: 0: QS: -: Sg: 293498: Bk: 368585: zinc finge: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_314




ZNF556: FL: KW_TTTGTA40NTCC_4: AA-m1: VR: 0: QS: -: Sg: 282673: Bk: 351505: krueppel_box+Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_315




DRAP1: FL: KW_TCCACC40NTTA_4: ACCGAACAC-m1: VR: 785: QS: 96-0.2: Sg: 270775: Bk: 368861: CBFA_NFYB_domain: maybe: maybe one of the common suspectsa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_316




HLF: FL: KW_TTAGCG40NAGA_4: TTRCGYAA-m1!!: VR: 18329: QS: 80-0: Sg: 408498: Bk: 446986: bZIP_1: OK, there is also the other direction homodimer: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_317




HLF: FL: KW_TTAGCG40NAGA_4: CGTAANNNNNNNNNNNNTTACG-m1!!: VR: 1622: QS: 91-0: Sg: 408498: Bk: 446986: bZIP_1: The other direction hhomodimer: Correct consensus, but seems to have some sort of positional issuesa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_318




NFE2: FL: KW_TTTAGC40NGAC_3b0: ATGACTCAT-m1: VR: 322: QS: 99-0.1: Sg: 413365: Bk: 194932: bZIP_1: weak: cycle3-4 selects very badly, 1to2 or 2to3 is probably finea.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_319




ATOH7: FL: KW_TACCTT40NCGA_4: AA-m1: VR: 0: QS: -: Sg: 286933: Bk: 409762: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_320




ZNF597: FL: KW_TATTCA40NAGT_4: NGCCGCCATYTTGN-m1!!: VR: 17813: QS: 100-0: Sg: 280372: Bk: 346247: krueppel_box+Znf_C2H2: New motif: probably ok, could be of course contamination by another znf, has also a weaker dimera.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_321




HOXD3: FL: KW_TACATA40NAGA_4: CTAATKAC-m1!!: VR: 19239: QS: 100-0.1: Sg: 295703: Bk: 399765: Homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_322




ZBTB25: FL: KW_TAAGTC40NCGT_4: AA-m1: VR: 0: QS: -: Sg: 254127: Bk: 280330: BTB+znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_323




PKNOX1: FL: KW_TGAGTT40NCGG_4: TGACAGSTGTCA-m1!!: VR: 36901: QS: 100-0: Sg: 306085: Bk: 314856: Homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_324




SIX2: FL: KW_TTGTGG40NCGG_4: AA-m1: VR: 0: QS: -: Sg: 215019: Bk: 290359: Homeodomain: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_325




ESRRG: FL: KW_TGAGCT40NGCA_4: TCAAGGTCR-m1!!: VR: 19976: QS: 97-0: Sg: 367668: Bk: 361058: nuclear receptor: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_326




ZNF474: FL: KW_TTCACC40NGCT_4: AA-m1: VR: 0: QS: -: Sg: 285035: Bk: 307700: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_327




PBX1: FL: KW_TCGGTG40NCAA_4: RTCAATCA-m1!!: VR: 1048: QS: 92-0.2: Sg: 327134: Bk: 322578: Homeodomain: weak: bit weak but definitely correcta.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_328




POLE4: FL: KW_TGCTTT40NAGA_4: GGTGTNCGAAA-m1!!: VR: 270: QS: 96-0.2: Sg: 345168: Bk: 397482: 0: maybe: weak, one of the usual suspects?a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_329




CSDC2: FL: KW_TTTGTT40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 404879: Bk: 379758: CSP_DNA-bd: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_330




ZNF428: FL: KW_TGGTTA40NTAC_4: AA-m1: VR: 0: QS: -: Sg: 384295: Bk: 369856: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_331




C17orf49: FL: KW_TTGTAC40NGTA_4: AA-m1: VR: 0: QS: -: Sg: 447810: Bk: 416221: Homeodomain: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_332




NEUROG3: FL: KW_TGGACT40NAAT_4: AA-m1: VR: 0: QS: -: Sg: 269470: Bk: 285587: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_333




HAND1: FL: KW_TCTCTC40NTTG_4: AA-m1: VR: 0: QS: -: Sg: 273915: Bk: 256204: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_334




HMX2: FL: KW_TACTTA40NCTA_4: CCAMTTAA-m1!!: VR: 2080: QS: 87-0.1: Sg: 240421: Bk: 302609: Homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_335




FOXR1: FL: KW_TCGTGG40NTCT_4: AA-m1: VR: 0: QS: -: Sg: 175192: Bk: 222687: forkhead: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_336




FOXB1: FL: KW_TTCGGC40NAGC_4: AA-m1: VR: 0: QS: -: Sg: 361978: Bk: 340359: forkhead : fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_337




ZNF396: FL: KW_TGTGGT40NGGC_4: AA-m1: VR: 0: QS: -: Sg: 165094: Bk: 213367: SCAN+znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_338




POU5F1: FL: KW_TCGGAC40NCCA_4: TATGCNAATGA-m1!!: VR: 67767: QS: 100-0.1: Sg: 305262: Bk: 279693: POU: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_339




PBX4: FL: KW_TACTAG40NGGA_4: AA-m1: VR: 0: QS: -: Sg: 200247: Bk: 216610: Homeodomain: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_340




TEAD1: FL: KW_TCACGC40NACT_4: RCATWCC-m1!!: VR: 19575: QS: 100-0.1: Sg: 309669: Bk: 248066: TEA: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_341




BARX1: FL: KW_TTCTGT40NAAC_4: AA-m1: VR: 0: QS: -: Sg: 345384: Bk: 357711: Homeodomain: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_342




OVOL2: FL: KW_TCGCGT40NCGG_4: AA-m1: VR: 0: QS: -: Sg: 405909: Bk: 452397: Znf_C2H2: fail: a.s. 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_343




RHOXF2: FL: KW_TCTACG40NCTC_4: YTAATCC-m1!!: VR: 33587: QS: 100-0: Sg: 339164: Bk: 322918: Homeodomain: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_344




FOSL2: FL: KW_TACCGA40NATA_4: AA-m1: VR: 0: QS: -: Sg: 215603: Bk: 237784: bZIP: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_345




ATF4: FL: KW_TCTAGG40NCTG_4: WRGATGACGTCATCYW-m1!!: VR: 37303: QS: 100-0.3: Sg: 204011: Bk: 210460: bZIP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_346




ELF3: FL: KW_TATGTA40NTGT_4: ACCCGGAAGT-m1: VR: 2351: QS: 98-0.1: Sg: 176299: Bk: 190166: ETS: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_347




ELF3: FL: KW_TATGTA40NTGT_4: ACCCGGAAGNNNNNNNNNAAAAT-m2!!: VR: 749: QS: 100-0.1: Sg: 176299: Bk: 190166: ETS: ok: secondary, what is this truly epic A-stack far away??a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_348




ELF3: FL: KW_TATGTA40NTGT_4: TGTGCGGATG-m1: VR: 418: QS: 98-0.5: Sg: 176299: Bk: 190166: ETS: ok: secondarya.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_349




ZNF174: FL: KW_TTCGGG40NGAG_4: AA-m1: VR: 0: QS: -: Sg: 224859: Bk: 216211: SCAN+znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_350




ZNF193: FL: KW_TGCCGA40NGTA_4: AA-m1: VR: 0: QS: -: Sg: 223363: Bk: 227599: SCAN+znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_351




PAX8: FL: KW_TTCGTC40NCGT_4: AA-m1: VR: 0: QS: -: Sg: 187465: Bk: 222152: PAX: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_352




ZNF672: FL: KW_TTGGCC40NTCG_4: AA-m1: VR: 0: QS: -: Sg: 231543: Bk: 237852: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_353




RXRA: FL: KW_TCCCGC40NACA_4: AA-m1: VR: 0: QS: -: Sg: 287588: Bk: 319259: nuclear receptor: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_354




SMAD5: FL: KW_TAGATG40NTAT_4: AA-m1: VR: 0: QS: -: Sg: 290176: Bk: 304254: MAD: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_355




DR1: FL: KW_TGCGCA40NCAA_4: GGTGTNCGAAA-m1!!: VR: 878: QS: 99-0.2: Sg: 280257: Bk: 285788: CBFA_NFYB_domain: maybe: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_356




ATF3: FL: KW_TTTGAC40NGGT_4: GRTGACGTCAYC-m1!!: VR: 51171: QS: 100-0: Sg: 328238: Bk: 376562: bZIP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_357




ELF5: FL: KW_TCTGCA40NATA_4: AMCCGGAAGT-m1: VR: 21621: QS: 99-0.1: Sg: 307030: Bk: 315794: ETS: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_358




ELF5: FL: KW_TCTGCA40NATA_4: CCGAACCGGAAGT-m1!!: VR: 5143: QS: 100-0.3: Sg: 307030: Bk: 315794: ETS: ok, homodimer: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_359




ELF5: FL: KW_TCTGCA40NATA_4: ANCCGGAAGTNNRCTTM-m1!!: VR: 8286: QS: 100-0.2: Sg: 307030: Bk: 315794: ETS: ok, homodimer: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_360




ELF5: FL: KW_TCTGCA40NATA_4: ANNNGGAANNAGGAAGT-m1!!: VR: 5427: QS: 100-0.1: Sg: 307030: Bk: 315794: ETS: ok, homodimer: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_361




MLX: FL: KW_TGCCAA40NTAG_4: NNRTCACGTGNN-m1!!: VR: 19232: QS: 100-0.2: Sg: 396251: Bk: 352864: bHLH: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_362




KLF7: FL: KW_TGACAA40NACT_4: AA-m1: VR: 0: QS: -: Sg: 247324: Bk: 222139: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_363




DMRTB1: FL: KW_TTTACT40NACA_4: AA-m1: VR: 0: QS: -: Sg: 239964: Bk: 270101: DM_DNA-bd: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_364




CREB3: FL: KW_TCACAT40NATG_4: NGCCACGTCAYN-m1!!: VR: 14837: QS: 99-0: Sg: 327728: Bk: 302119: bZIP: ok. Primary motif.: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_365




CREB3: FL: KW_TCACAT40NATG_4: RTGACGTCAY-m1!!: VR: 6044: QS: 99-0: Sg: 327728: Bk: 302119: bZIP: ok. Secondary motif.: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_366




KLF15: FL: KW_TGGTCG40NTAA_4: NCCMCGCCCMC-m1!!: VR: 4576: QS: 90-0.2: Sg: 191125: Bk: 188981: Znf_C2H2: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_367




ZNF557: FL: KW_TGCTCA40NCTG_4: AA-m1: VR: 0: QS: -: Sg: 268709: Bk: 259188: krueppel_box+Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_368




HOXA3: FL: KW_TACTGG40NGGA_4: AA-m1: VR: 0: QS: -: Sg: 21062: Bk: 75575: Homeodomain: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_369




NR5A1: FL: KW_TACCAA40NTTA_4: TCAAGGTCA-m1!!: VR: 18121: QS: 99-0: Sg: 389808: Bk: 385830: nuclear receptor: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_370




LHX8: FL: KW_TAGCTG40NCTA_3b0: NYAATTAN-m1!!: VR: 24097: QS: 100-0.2: Sg: 375679: Bk: 200062: Homeodomain: ok: Needs earlier cyclea.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_371




ZSCAN1: FL: KW_TTTCTA40NCAT_4: GCCACGTCAC-m1: VR: 9450: QS: 99-0.1: Sg: 316449: Bk: 355903: SCAN+znf_C2H2: contaminated: One of the CREB3 proteinsa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_372




E2F3: FL: KW_TGGTGG40NTAA_4: AA-m1: VR: 0: QS: -: Sg: 266312: Bk: 256998: E2F: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_373




ZNF436: FL: KW_TAGCGC40NCGC_4: GCTAANCCCAC-m1!!: VR: 889: QS: 100-0.4: Sg: 277042: Bk: 284649: krueppel_box+Znf_C2H2: New motif ?: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_374




ZNF436: FL: KW_TAGCGC40NCGC_4: CCTCCACCGC-m1: VR: 4263: QS: 100-0.2: Sg: 277042: Bk: 284649: krueppel_box+Znf_C2H2: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_375




ZNF833P: FL: KW_TCTGCC40NCAC_4: AA-m1: VR: 0: QS: -: Sg: 239115: Bk: 235454: zinc finger: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_376




MAFF: FL: KW_TCGCCG40NTGC_4: TGCTGANTCAGCA-m1!!: VR: 2718: QS: 90-0: Sg: 199109: Bk: 184740: bZIP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_377




CPSF4L: FL: KW_TCTCCA40NGGA_4: AA-m1: VR: 0: QS: -: Sg: 191574: Bk: 198794: Znf_CCCH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_378




BHLHA15: FL: KW_TACGAT40NCCG_4: AA-m1: VR: 0: QS: -: Sg: 6747: Bk: 50270: bHLH: fail: a.s. 2 2 3 3 4 2 2 3 3 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_379




ZNF740: FL: KW_TTATTT40NCGT_4: CCCCCCCCAC-m1: VR: 5099: QS: 95-0.2: Sg: 179479: Bk: 219588: Znf_C2H2: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_380




MYOD1: FL: KW_TACTAA40NATT_4: AACAGCTGTT-m1: VR: 3886: QS: 100-0: Sg: 255371: Bk: 226791: bHLH: New motif. Primary motif.: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_381




MYOD1: FL: KW_TACTAA40NATT_4: CGTCAGCTGT-m1: VR: 3012: QS: 99-0: Sg: 255371: Bk: 226791: bHLH: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_382




EN2: FL: KW_TAAGGC40NTGA_4b0: YAATTA-m1!!: VR: 8646: QS: 90-0: Sg: 216810: Bk: 150633: Homeodomain: weak: hint of signal on kmerseeda.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_383




YOD1: FL: KW_TCTGTC40NCAA_4: TGAATNNNATTCA-m1!!: VR: 167: QS: 99-0.1: Sg: 203328: Bk: 205908: 0: contaminated: weak SOX-hairpinsa.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_384




HOXD9: FL: KW_TCTCCT40NCCT_4: GTCGTAAAA-m1: VR: 26588: QS: 100-0: Sg: 315371: Bk: 354639: Homeodomain: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_385




HOXD9: FL: KW_TCTCCT40NCCT_4: GYAATWAAA-m1!!: VR: 32461: QS: 99-0: Sg: 315371: Bk: 354639: Homeodomain: Secondary motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_386




ZNF781: FL: KW_TGAGAC40NCAA_4: AA-m1: VR: 0: QS: -: Sg: 251838: Bk: 251818: Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_387




FOXL2: FL: KW_TTCAGG40NTGC_4: GTAAACA-m1: VR: 3477: QS: 92-0.1: Sg: 254216: Bk: 316503: forkhead: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_388




FOXI1: FL: KW_TGCCCT40NTCG_4: AA-m1: VR: 0: QS: -: Sg: 308462: Bk: 412007: forkhead: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_389




SLC2A4RG: FL: KW_TGCTGG40NGCC_4: GAGTCGGCA-m1!!: VR: 280: QS: 86-0.3: Sg: 218127: Bk: 276735: Znf_C2H2: maybe: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_390




SOHLH1: FL: KW_TCAGAA40NAGG_4: AA-m1: VR: 0: QS: -: Sg: 182172: Bk: 225418: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_391




ZNF514: FL: KW_TTGCTT40NCCA_4: AA-m1: VR: 0: QS: -: Sg: 260955: Bk: 230511: krueppel_box+Znf_C2H2: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_392




IRX5: DBD: KW_TACGGG40NCTT_4: CATGTNNNACATG-m1!!: VR: 1644: QS: 88-0: Sg: 294617: Bk: 314450: Homeobox: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_393




WHSC1: DBD: KW_TTGCTC40NGAA_4: AA-m1: VR: 0: QS: -: Sg: 212394: Bk: 261369: Znf_PHD: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_394




NEUROD4: DBD: KW_TTGATG40NATC_4: AA-m1: VR: 0: QS: -: Sg: 264640: Bk: 311750: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_395




TCF7L1: DBD: KW_TAAGGG40NACC_4: CATCGNNNCGCTG-m1!!: VR: 24152: QS: 100-0: Sg: 271566: Bk: 319781: HMG: maybe: similar to the other odd sites seen in new bacterial experiments, canonical is very weak or missinga.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_396




CEBPG: DBD: KW_TATATG40NCTA_4: TTRCGCAA-m1!!: VR: 6764: QS: 85-0.1: Sg: 334734: Bk: 381283: bZIP: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_397




KLF6: DBD: KW_TGCTCC40NCCG_4: CCACGCCCAC-m1: VR: 1674: QS: 98-0.2: Sg: 287101: Bk: 288027: Znf_C2H2: New motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_398




MYCL1: DBD: KW_TCATGA40NAGT_4: AA-m1: VR: 0: QS: -: Sg: 94871: Bk: 308920: bHLH: fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_399




ID3: DBD: KW_TATATA40NGCT_4: AA-m1: VR: 0: QS: -: Sg: 296306: Bk: 318647: bHLH: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_400




DDIT3: DBD: KW_TCTTAT40NACA_4: AA-m1: VR: 0: QS: -: Sg: 3338: Bk: 4936: Tubby_N: Fail: a.s. 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_401




ZNF564: DBD: KW_TCTGGG40NCTG_4: ACATCGRGRCGCTGW-m1!!: VR: 16927: QS: 100-0: Sg: 325937: Bk: 387557: krueppel_box+Znf_C2H2: New motif, contamination or common suspect.: It's the same with the motif enriched by TCF7L1 in this batch.a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_402




BATF3: DBD: KW_TGGAGT40NTGG_4: RTGACGTCAY-m1!!: VR: 9325: QS: 100-0: Sg: 257135: Bk: 262519: bZIP_1: ok: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_403




ZNF595: FL: KW_TGCACG40NTTG_4: AA-m1: VR: 0: QS: -: Sg: 337781: Bk: 330166: krueppel_box: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_404




IGHM: FL: KW_TGACAT40NCGG_4: AA-m1: VR: 0: QS: -: Sg: 256645: Bk: 252430: 0: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_405




ELF1: FL: KW_TAAGCA40NGTC_4: AACCCGGAAGT-m1!!: VR: 17159: QS: 100-0: Sg: 357224: Bk: 288001: ETS: ok, primary motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_406




ELF1: FL: KW_TAAGCA40NGTC_4: ATGCGGAAGT-m1: VR: 8916: QS: 100-0: Sg: 357224: Bk: 288001: ETS: ok, secondary motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_407




ELF1: FL: KW_TAAGCA40NGTC_4: TTTCGNNNNNNNNNNNNNNNCGGAAGT-m1!!: VR: 775: QS: 99-0.1: Sg: 357224: Bk: 288001: ETS: ok, one of dimers: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_408




ZNF704: DBD: KW_TGTCGA40NGCA_4: AA-m1: VR: 0: QS: -: Sg: 232306: Bk: 233342: Znf_C2H2: Fail: a.s. 1 1 3 3 4 4 1 1 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_409




ZNF503: DBD: KW_TAGGTT40NAAG_4: AA-m1: VR: 0: QS: -: Sg: 264838: Bk: 275198: Znf_C2H2: Fail: a.s. 2 2 3 3 4 4 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_410




PHF20: DBD: KW_TACGGT40NTAC_4: AA-m1: VR: 0: QS: -: Sg: 237271: Bk: 240997: 0: Fail: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_411




SPDEF: DBD: KW_TAGAGA40NCGC_4: AMCCGGATGTN-m1: VR: 52833: QS: 100-0.1: Sg: 298888: Bk: 413944: ETS: : a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_412




MYOD1: DBD: KW_TGAATT40NTAA_4: AACAGCTGTT-m1: VR: 1187: QS: 100-0.1: Sg: 334738: Bk: 399712: bHLH: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_413




MYOD1: DBD: KW_TGAATT40NTAA_4: AACATATGTT-m1: VR: 620: QS: 98-0.1: Sg: 334738: Bk: 399712: bHLH: OK, secondary motif: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_414




HES5: DBD: KW_TGCCTC40NCAA_4: GRCACGTGYC-m1!!: VR: 56561: QS: 100-0: Sg: 491907: Bk: 330218: bHLH: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_415




NKX6-2: DBD: KW_TATTTC40NGCA_4: NNNTCATTAWNNN-m1!!: VR: 20392: QS: 99-0: Sg: 442246: Bk: 421895: Homeodomain: OK: a.s. 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4 1 1 2 2 3 3 4 4k.s. 1 1 2 2 3 3 4 4PWM
NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND NOT FOUND
1_416




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